Email this article Trend and impact of plant cell publications: a bibliometric analysis of global research output from 1992 to 2016
Abstract
Keywords
Full Text:
References
Abad, P., Gouzy, J., Aury, J.M., Castagnone-Sereno, P., Danchin, E.G.J., Deleury, E., Perfus-Barbeoch, L., Anthouard, V., Artiguenave, F., Blok, V.C., Caillaud, M.C., Coutinho, P.M., Dasilva, C., De Luca, F., Deau, F., Esquibet, M., Flutre, T., Goldstone, J.V., Hamamouch, N., Hewezi, T., Jaillon, O., Jubin, C., Leonetti, P., Magliano, M., Maier, T.R., Markov, G.V., McVeigh, P., Pesole, G., Poulain, J., Robinson-Rechavi, M., Sallet, E., Segurens, B., Steinbach, D., Tytgat, T., Ugarte, E., van Ghelder, C., Veronico, P., Baum, T.J., Blaxter, M., Bleve-Zacheo, T., Davis, E.L., Ewbank, J.J., Favery, B., Grenier, E., Henrissat, B., Jones, J.T., Laudet, V., Maule, A.G., Quesneville, H., Rosso, M.N., Schiex, T., Smant, G., Weissenbach, J. and Wincker, P., 2008. Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology, 26(8), 909-915. https://doi.org/10.1038/nbt.1482
Adl, S.M., Simpson, A.G.B., Lane, C.E., Luke, J., Bass, D., Bowser, S.S., Brown, M.W., Burki, F., Dunthorn, M., Hampl, V., Heiss, A., Hoppenrath, M., Lara, E., le Gall, L., Lynn, D.H., McManus, H., Mitchell, E.A.D., Mozley-Stanridge, S.E., Parfrey, L.W., Pawlowski, J., Rueckert, S., Shadwick, L., Schoch, C.L., Smirnov, A. and Spiegel, F.W., 2012. The revised classification of eukaryotes. Journal of Eukaryotic Microbiology, 59(5), 429-514. https://doi.org/10.1111/j.1550-7408.2012.00644.x
Alscher, R.G., Erturk, N. and Heath, L.S., 2002. Role of superoxide dismutases (SODs) in controlling oxidative stress in plants. Journal of Experimental Botany, 53(372), 1331-1341. https://doi.org/10.1093/jexbot/53.372.1331
Blokhina, O., Virolainen, E. and Fagerstedt, K.V., 2003. Antioxidants, oxidative damage and oxygen deprivation stress: a review. Annals of Botany, 91(2), 179-194. https://doi.org/10.1093/aob/mcf118
Boch, J., Scholze, H., Schornack, S., Landgraf, A., Hahn, S., Kay, S., Lahaye, T., Nickstadt, A. and Bonas, U., 2009. Breaking the code of DNA binding specificity of TAL-type III effectors. Science, 326(5959), 1509-1512. https://doi.org/10.1126/science.1178811
Boller, T. and Kende, H., 1979. Hydrolytic enzymes in the central vacuole of plant cells. Plant Physiology, 63(6), 1123-1132. https://doi.org/10.1104/pp.63.6.1123
Bradley, D.J., Kjellbom, P. and Lamb, C.J., 1992. Elicitor-and wound-induced oxidative cross-linking of a proline-rich plant cell wall protein: a novel, rapid defense response. Cell, 70(1), 21-30. https://doi.org/10.1016/0092-8674(92)90530-P
Burton, R.A. and Fincher, G.B., 2014. Plant cell wall engineering: applications in biofuel production and improved human health. Current Opinion in Biotechnology, 26, 79-84. https://doi.org/10.1016/j.copbio.2013.10.007
Cavalier-Smith, T., 2009. Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree. Biology Letters, 6 (3), 342-345. https://doi.org/10.1098/rsbl.2009.0948
Chen, H. and Ho, Y.S., 2015. Highly cited articles in biomass research: A bibliometric analysis. Renewable and Sustainable Energy Reviews, 49, 12-20. https://doi.org/10.1016/j.rser.2015.04.060
Chiu, W.L., Niwa, Y., Zeng, W., Hirano, T., Kobayashi, H. and Sheen, J., 1996. Engineered GFP as a vital reporter in plants. Current Biology, 6(3), 325-330. https://doi.org/10.1016/S0960-9822(02)00483-9
Chiu, W.T. and Ho, Y.S., 2007. Bibliometric analysis of tsunami research. Scientometrics, 73(1), 3-17. https://doi.org/10.1007/s11192-005-1523-1
Chuang, K.Y. and Ho, Y.S., 2015. An evaluation based on highly cited publications in Taiwan. Current Science, 108(5), 933-941.
Chuang, K.Y., Wang, M.H. and Ho, Y.S., 2011. High-impact papers presented in the subject category of water resources in the Essential Science Indicators database of the Institute for Scientific Information. Scientometrics, 87 (3), 551-562. https://doi.org/10.1007/s11192-011-0365-2
Chuang, K.Y., Olaiya, M.T. and Ho, Y.S., 2012. Bibliometric analysis of the Polish Journal of Environmental Studies (2000-11).
Polish Journal of Environmental Studies, 21(5), 1175-1183.
Cosgrove, D.J., 2005. Growth of the plant cell wall. Nature Reviews Molecular Cell Biology, 6(11), 850-861. https://doi.org/10.1038/nrm1746
Elango, B. and Ho, Y.S., 2017. A bibliometric analysis of highly cited papers from India in Science Citation Index Expanded. Current Science, 112(8), 1653-1658. https://doi.org/10.18520/cs/v112/1653-1658
Foreman, J., Demidchik, V., Bothwell, J.H.F., Mylona, P., Miedema, H., Torres, M.A., Linstead, P., Costa, S., Brownlee, C., Jones, J.D.G., Davies, J.M. and Dolan, L., 2003. Reactive oxygen species produced by NADPH oxidase regulate plant cell growth. Nature, 422(6930), 442-446. https://doi.org/10.1038/nature01485
Fu, H.Z. and Ho, Y.S., 2013. Comparison of independent research of China’s top universities using bibliometric indicators. Scientometrics, 96(1), 259-276. https://doi.org/10.1007/s11192-012-0912-5
Fu, H.Z. and Ho, Y.S., 2014. Top cited articles in adsorption research using Y-index. Research Evaluation, 23(1), 12-20. https://doi.org/10.1093/reseval/rvt018
Fu, H.Z. and Ho, Y.S., 2015. A bibliometric analysis of the Journal of Membrane Science (1976-2010). The Electronic Library, 33(4), 698-713. https://doi.org/10.1108/EL-12-2013-0221
Fu, H.Z., Wang, M.H. and Ho, Y.S., 2012. The most frequently cited adsorption research articles in the Science Citation Index (Expanded). Journal of Colloid and Interface Science, 379(1), 148-156. https://doi.org/10.1016/j.jcis.2012.04.051
Fu, H.Z., Wang, M.H. and Ho, Y.S., 2013. Mapping of drinking water research: A bibliometric analysis of research output during 19922011. Science of the Total Environment, 443, 757-765. https://doi.org/10.1016/j.scitotenv.2012.11.061
Garfield, E., 1990. KeyWords Plus: takes you beyond title words. Part 2. Expanded journal coverage for Current Contents on Diskette, includes social and behavioral sciences. Current Contents, 33, 5-9.
Garfield, E., 1990. KeyWords Plus: ISI’s breakthrough retrieval
method. Part 1. Expanding your searching power on Current
Contents on Diskette. Current Contents, 32, 5-9.
Gautheret, R.J., 1983. Plant tissue culture: A history. Botanical Magazine Tokyo, 96 (4), 393-410. https://doi.org/10.1007/BF02488184
Grasso, C., 1993. The Experimental Philosophy of Farming: Jared Eliot and the Cultivation of Connecticut. The William and Mary Quarterly, 50(3), 502-528. https://doi.org/10.2307/2947364
Guimar˜aes, J.A. and Carlini, C.R., 2004. Most cited papers in Toxicon. Toxicon, 44(4), 345-359. https://doi.org/10.1016/j.toxicon.2004.05.002
Gunning, B.E.S. and Pate, J.S., 1969. “Transfer cells” plant cells with wall ingrowths, specialized in relation to short distance transport of solutestheir occurrence, structure, and development. Protoplasma, 68(1-2), 107-133. https://doi.org/10.1007/BF01247900
Ho, Y.S., 2012. Top-cited articles in chemical engineering in Science Citation Index Expanded: A bibliometric analysis. Chinese Journal of Chemical Engineering, 20(3), 478-488. https://doi.org/10.1016/S1004-9541(11)60209-7
Ho, Y.S., 2014. Classic articles on social work field in Social Science Citation Index: a bibliometric analysis. Scientometrics,
(1), 137-155. https://doi.org/10.1007/s11192-013-1014-8
Ho, Y.S. and Fu, H.Z., 2016. Mapping of metal-organic frameworks publications: A bibliometric analysis. Inorganic Chemistry Communications, 73, 174-182. https://doi.org/10.1016/j.inoche.2016.10.023
Ho, Y.S. and Kahn, M., 2014. A bibliometric study of highly cited reviews in the Science Citation Index Expanded. Journal of the Association for Information Science and Technology, 65(2), 372-385.
https://doi.org/10.1002/asi.22974
Hussain, M.S., Fareed, S., Ansari, S., Rahman, M.A., Ahmad, I.Z. and Saeed, M., 2012. Current approaches toward production of secondary plant metabolites. Journal of Pharmacy & Bioallied Sciences, 4 (1), 10-20. https://doi.org/10.4103/0975-7406.92725
Jin, H. and Martin, C., 1999. Multifunctionality and diversity within the plant MYB-gene family. Plant Molecular Biology, 41, 577-585.
https://doi.org/10.1023/A:1006319732410
Jones, L., Seymour, G.B. and Knox, J.P., 1997. Localization of pectic galactan in tomato cell walls using a monoclonal antibody specific to (1[->]4)-[beta]-D-galactan. Plant Physiology, 113(4), 1405-1412.
https://doi.org/10.1104/pp.113.4.1405
Kaku, H., Nishizawa, Y., Ishii-Minami, N., Akimoto-Tomiyama, C., Dohmae, N., Takio, K., Minami, E. and Shibuya, N., 2006. Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor. Proceedings of the National Academy of Sciences of the United States of America, 103(29), 11086-11091. https://doi.org/10.1073/pnas.0508882103
Karley, A.J., Douglas, A.E. and Parker, W.E., 2002. Amino acid composition and nutritional quality of potato leaf phloem sap for aphids. Journal of Experimental Biology, 205(19), 3009-3018.
Khvorova, A., Reynolds, A. and Jayasena, S.D., 2003. Functional siRNAs and miRNAs exhibit strand bias. Cell, 115(2), 209-216.
https://doi.org/10.1016/S0092-8674(03)00801-8
Li, J.F., Zhang, Y.H., Wang, X.S. and Ho, Y.S., 2009a. Bibliometric analysis of atmospheric simulation trends in meteorology and atmospheric science journals. Croatica Chemica Acta, 82(3), 695-705.
Li, L.L., Ding, G.H., Feng, N., Wang, M.H. and Ho, Y.S., 2009b, Global stem cell research trend: Bibliometric analysis as a tool for mapping of trends from 1991 to 2006. Scientometrics, 80 (1), 39-58.
https://doi.org/10.1007/s11192-008-1939-5
Li, Z. and Ho, Y.S., 2008. Use of citation per publication as an indicator to evaluate contingent valuation research. Scientometrics, 75(1), 97-110. https://doi.org/10.1007/s11192-007-1838-1
Lin, C.L. and Ho, Y.S., 2015. A bibliometric analysis of publications on pluripotent stem cell research. Cell Journal(Yakhteh), 17 (1), 59-70. https://doi.org/10.22074/cellj.2015.512
Martin, F., Aerts, A., Ahren, D., Brun, A., Danchin, E.G.J., Duchaussoy, F., Gibon, J., Kohler, A., Lindquist, E., Pereda, V., Salamov, A., Shapiro, H.J., Wuyts, J., Blaudez, D., Buee, M., Brokstein, P., Canback, B., Cohen, D., Courty, P.E., Coutinho, P.M., Delaruelle, C., Detter, J.C., Deveau, A., DiFazio, S., Duplessis, S., Fraissinet-Tachet, L., Lucic, E., FreyKlett, P., Fourrey, C., Feussner, I., Gay, G., Grimwood, J., Hoegger, P.J., Jain, P., Kilaru, S., Labbe, J., Lin, Y.C., Legue, V., Le Tacon, F., Marmeisse, R., Melayah, D., Montanini, B., Muratet, M., Nehls, U., Niculita-Hirzel, H., Oudot-Le Secq, M.P., Peter, M., Quesneville, H., Rajashekar, B., Reich, M., Rouhier, N., Schmutz, J., Yin, T., Chalot, M., Henrissat, B., Kues, U., Lucas, S., Van de Peer, Y., Podila, G.K., Polle, A., Pukkila, P.J., Richardson, P.M., Rouze, P., Sanders, I.R., Stajich, J.E., Tunlid, A., Tuskan, G. and Grigoriev, I.V., 2008. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature, 452(7183), 88-92. https://doi.org/10.1038/nature06556
Martinez, D., Berka, R.M., Henrissat, B., Saloheimo, M., Arvas, M., Baker, S.E., Chapman, J., Chertkov, O., Coutinho, P.M., Cullen, D., Danchin, E.G.J., Grigoriev, I.V., Harris, P., Jackson, M., Kubicek, C.P., Han, C.S., Ho, I., Larrondo, L.F., de Leon, A.L., Magnuson, J.K., Merino, S., Misra, M., Nelson, B., Putnam, N., Robbertse, B., Salamov, A.A., Schmoll, M., Terry, A., Thayer, N., Westerholm-Parvinen, A., Schoch, C.L., Yao, J., Barabote, R., Nelson, M.A., Detter, C., Bruce, D., Kuske, C.R., Xie, G., Richardson, P., Rokhsar, D.S., Lucas, S.M., Rubin, E.M., Dunn-Coleman, N., Ward, M. and Brettin, T.S., 2008. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nature Biotechnology, 26(5), 553-560. https://doi.org/10.1038/nbt1403
Mitani, Y., Oshima, Y., Mitsuda, N., Tomioka, A., Sukegawa, M., Fujita, M., Kaji, H. and Ohmiya, Y., 2017. Efficient production of glycosylated Cypridina luciferase using plant cells. Protein expression and purification, 133, 102-109. https://doi.org/10.1016/j.pep.2017.03.008
Morant, M., Jφrgensen, K., Schaller, H., Pinot, F., Mller, B.L., Werck-Reichhart, D. and Bak, S., 2007. CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen. The Plant Cell, 19(5), 1473-1487. https://doi.org/10.1105/tpc.106.045948
Neuhaus, J.M. and Rogers, J.C. (1998) Sorting of proteins to vacuoles in plant cells. pp.127-144. In: Soll J (ed), Protein Trafficking in Plant Cells. Springer, Dordrecht. https://doi.org/10.1007/978-94-011-5298-3 7
Picknett, T. and Davis, K., 1999. The 100 most-cited articles from JMB. Journal of Molecular Biology, 293(2), 171-174. https://doi.org/10.1006/jmbi.1999.3148
Pollard, T.D. and Cooper, J.A., 2009. Actin, a central player in cell shape and movement. Science, 326(5957), 1208-1212. https://doi.org/10.1126/science.1175862
Raghavendra, A.S., Padmasree, K. and Saradadevi, K., 1994. Interdependence of photosynthesis and respiration in plant cells: interactions between chloroplasts and mitochondria. Plant Science, 97(1), 1-14. https://doi.org/10.1016/0168-9452(94)90101-5
Ridley, B.L., O’Neill, M.A. and Mohnen, D., 2001. Pectins: structure, biosynthesis, and oligogalacturonide-related signaling. Phytochemistry, 57(6), 929-967. https://doi.org/10.1016/S0031-9422(01)00113-3
Slowing, I.I., Trewyn, B.G., Giri, S. and Lin, V.S.Y., 2007. Mesoporous silica nanoparticles for drug delivery and biosensing applications. Advanced Functional Materials, 17(8), 1225-1236. https://doi.org/10.1002/adfm.200601191
Stals, H. and Inz´e, D., 2001. When plant cells decide to divide. Trends in Plant Science, 6(8), 359-364. https://doi.org/10.1016/S1360-1385(01)02016-7
Tan, J., Fu, H.Z. and Ho, Y.S., 2014. A bibliometric analysis of research on proteomics in Science Citation Index Expanded. Scientometrics, 98(2), 1473-1490. https://doi.org/10.1007/s11192-013-1125-2
Thorpe, T.A., 2007. History of plant tissue culture. Molecular Biotechnology, 37(2), 169-180. https://doi.org/10.1007/s12033-007-0031-3
Torney, F., Trewyn, B.G., Lin, V.S.Y. and Wang, K., 2007. Mesoporous silica nanoparticles deliver DNA and chemicals into plants. Nature Nanotechnology, 2(5), 295-300. https://doi.org/10.1038/nnano.2007.108
van Kooten, O. and Snel, J.F.H., 1990. The use of chlorophyll fluorescence nomenclature in plant stress physiology. Photosynthesis Research, 25(3), 147-150. https://doi.org/10.1007/BF00033156
Vasil, I.K., 2008. A history of plant biotechnology: from the cell theory of Schleiden and Schwann to biotech crops. Plant Cell Reports, 27(9), 1423-1440. https://doi.org/10.1007/s00299-008-0571-4
Voinnet, O., Rivas, S., Mestre, P. and Baulcombe, D., 2003. Retracted: An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus. Plant Journal, 33(5), 949-956.
Voinnet, O., 2015. An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus (Retraction of Vol 33, Pg 949, 2003). Plant Journal, 83(4), 752.
Voinnet, O., Rivas, S., Mestre, P. and Baulcombe, D., 2015. An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus (Retraction of Vol 33, Pg 949, 2003). Plant Journal, 84(4), 846. https://doi.org/10.1111/tpj.13066
Wambu, E.W. and Ho, Y.S., 2016. A bibliometric analysis of drinking water research in Africa. Water SA, 42(4), 612-620. http://dx.doi.org/10.4314/wsa.v42i4.12
Wambu, E.W., Fu, H.Z. and Ho, Y.S., 2017. Characteristics and trends in global tea research: a Science Citation Index Expandedbased analysis. International Journal of Food Science & Technology, 52(3), 644-651. http://dx.doi.org/10.1111/ijfs.13317
Wang, C.C. and Ho, Y.S., 2016. Research trend of metaorganic frameworks: a bibliometric analysis. Scientometrics, 109(1), 481-513. https://doi.org/10.1007/s11192-016-1986-2
Wang, M.H., Fu, H.Z. and Ho, Y.S., 2011. Comparison of universities’ scientific performance using bibliometric indicators. Malaysian Journal of Library & Information Science, 16(2), 1-19.
Wang, M.H., Yu, T.C. and Ho, Y.S., 2010. A bibliometric analysis of the performance of Water Research. Scientometrics, 84(3), 813-820.
https://doi.org/10.1007/s11192-009-0112-0
Yu, J.J., Wang, M.H., Xu, M. and Ho, Y.S., 2012. A bibliometric analysis of research papers published on photosynthesis: 19922009. Photosynthetica, 50(1), 5-14. https://doi.org/10.1007/s11099-012-0010-1
Zheng, M., Fu, H.Z. and Ho, Y.S., 2017. Research trends and hotspots related to ammonia oxidation based on bibliometric analysis. Environmental Science and Pollution Research, 24(25), 20409-20421. https://doi.org/10.1007/s11356-017-9711-0
Zhong, R. and Ye, Z.H., 2007. Regulation of cell wall biosynthesis. Current Opinion in Plant Biology, 10(6), 564-572. https://doi.org/10.1016/j.pbi.2007.09.001
Zwieniecki, M.A., Melcher, P.J. and Holbrook, N.M., 2001. Hydrogel control of xylem hydraulic resistance in plants. Science, 291(5506), 1059-1062. https://doi.org/10.1126/science.1057175
DOI: https://doi.org/10.26789/AEB.2018.01.003
Refbacks
- There are currently no refbacks.
Copyright (c) 2018 Trang Ngoc Kieu Nguyen, Ho Yuh-Shan
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.