Email this article Community structure of lactic acid producing bacteria in the guts of freshwater shrimps
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Amin, M., Adams, M., Bolch, C.J.S., and Burke, C.M., 2017. In vitro screening of lactic acid bacteria isolated from gastrointestinal tract of Atlantic Salmon (Salmo salar) as probiont candidates. Aquaculture International, 25(1), 485-498. https://doi.org/10.1007/s10499-016-0045-6
Bachere, E., 2000. Shrimp immunity and disease control - Introduction. Aquaculture, 191(1-3), 3-11. https://doi.org/10.1016/S0044-8486(00)00413-0
Bahrndorff, S., de Jonge, N., Skovgard, H., and Nielsen, J.L., 2017. Bacterial Communities Associated with Houseflies (Musca domestica L.) Sampled within and between Farms. PLoS One, 12(1). https://doi.org/10.1371/journal.pone.0169753
Barszcz, M., Taciak, M., and Skomial, J., 2016. The effects of inulin, dried Jerusalem artichoke tuber and a multispecies probiotic preparation on microbiota ecology and immune status of the large intestine in young pigs. Archives of Animal Nutrition, 70(4), 278-292. https://doi.org/10.1080/1745039X.2016.1184368
Boulares, M., Mankai, M., Sadok, S., and Hassouna, M., 2017. Anti-Listerial inhibitory lactic acid bacteria in fresh farmed sea bass (Dicentrarchus labrax) fillets during storage at 4 degrees C under vacuum-packed conditions. Journal of Food Safety, 37(3).
Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., Fierer, N., Pena, A.G., Goodrich, J.K., Gordon, J.I., Huttley, G.A., Kelley, S.T., Knights, D., Koenig, J.E., Ley, R.E., Lozupone, C.A., McDonald, D., Muegge, B.D., Pirrung, M., Reeder, J., Sevinsky, J.R., Tumbaugh, P.J., Walters, W.A., Widmann, J., Yatsunenko, T., Zaneveld, J., and Knight, R., 2010. QIIME allows analysis of high-throughput community sequencing data. Nature Methods, 7(5), 335-336. https://doi.org/10.1038/nmeth.f.303
Chalova, V.I., Lingbeck, J.M., Kwon, Y.M., and Ricke, S.C., 2008. Extracellular antimutagenic activities of selected probiotic Bifidobacterium and Lactobacillus spp. as a function of growth phase. Journal of Environmental Science and Health Part B-Pesticides Food Contaminants and Agricultural Wastes, 43(2), 193-198.
https://doi.org/10.1080/03601230701795262
Cho, S., Hwang, O., and Park, S., 2015. Effect of dietary protein levels on composition of odorous compounds and bacterial ecology in pig manure. Asian-Australasian Journal of Animal Sciences, 28(9), 1362-1370.
Dige, I., Nyengaard, J.R., Kilian, M., and Nyvad, B., 2009. Application of stereological principles for quantification of bacteria in intact dental biofilms. Oral Microbiology and Immunology, 24(1), 69-75. https://doi.org/10.1111/j.1399-302x.2008.00482.x
Egan, A.F., 1983. Lactic-acid bacteria of meat and meat-products. Antonie Van Leeuwenhoek Journal of Microbiology, 49(3), 327-336.
Gatesoupe, F.J., 2008. Updating the importance of lactic acid bacteria in fish farming: Natural occurrence and probiotic treatments. Journal of Molecular Microbiology and Biotechnology, 14(1-3), 107-114. https://doi.org/10.1159/000106089
Ghanbari, M., Jami, M., Domig, K.J., and Kneifel, W., 2013. Seafood biopreservation by lactic acid bacteria - A review. Lwt-Food Science and Technology, 54 (2), 315-324. doi:10.1016/j.lwt.2013.05.039 https://doi.org/10.1016/j.lwt.2013.05.039
Godoy, F.A., Miranda, C.D., Wittwer, G.D., Aranda, C.P., and Calderon, R., 2015. High variability of levels of Aliivibrio and lactic acid bacteria in the intestinal microbiota of farmed Atlantic salmon Salmo salar L. Annals of Microbiology, 65(4), 2343-2353. https://doi.org/ 10.1007/s13213-015-1076-3
Gorham, J.B., Kang, S., Williams, B.A., Grant, L.J., McSweeney, C.S., Gidley, M.J., and Mikkelsen, D., 2017. Addition of arabinoxylan and mixed linkage glucans in porcine diets affects the large intestinal bacterial populations. European Journal of Nutrition, 56(6), 2193-2206. https://doi.org/10.1007/s00394-016-1263-4
Gungor, O.E., Kirzioglu, Z., Dincer, E., and Kivanc, M., 2013. Who will win the race in childrens’ oral cavities? Streptococcus mutans or beneficial lactic acid bacteria? Beneficial Microbes, 4(3), 237-245.
https://doi.org/10.3920/BM2012.0055
Guo, Y., Huang, Z.P., Liu, C.Q., Qi, L., Sheng, Y., and Zou, D.J., 2017. Modulation of the gut microbiome: a systematic review of the effect of bariatric surgery. European journal of endocrinology. https://doi.org/10.1530/EJE-17-0403
Hai, N.V., 2015. The use of probiotics in aquaculture. Journal of Applied Microbiology, 119(4), 917-935. https://www.dx.doi.org/10.1016/j.fsi.2015.05.026
Hatziioanou, D., Gherghisan-Filip, C., Saalbach, G., Horn, N., Wegmann, U., Duncan, S.H., Flint, H.J., Mayer, M.J., and Narbad, A., 2017. Discovery of a novel lantibiotic nisin O from Blautia obeum A2-162, isolated from the human gastrointestinal tract. Microbiology (Reading, England), 163(9), 1292-1305. https://doi.org/10.1099/mic.0.000515
Jeong, J.H., Lee, C.Y., and Chung, D.K., 2016. Probiotic lactic acid bacteria and skin health. Critical Reviews in Food Science and Nutrition, 56(14), 2331-2337. https://doi.org/10.1080/10408398.2013.834874
Kanmani, P., Satishkumar, R., Yuvaraj, N., Paari, K.A., Pattukumar, V., and Arul, V., 2011. The role of environmental factors and medium composition on bacteriocin production by an aquaculture probiotic Enterococcus faecium MC13 isolated from fish intestine. Korean Journal of Chemical Engineering, 28(3), 860-866. https://doi.org/10.1007/s11814-010-0443-9
Kobierecka, P.A., Wyszynska, A.K., Aleksandrzak-Piekarczyk, T., Kuczkowski, M., Tuzimek, A., Piotrowska, W., Gorecki, A., Adamska, I., Wieliczko, A., Bardowski, J., and JagusztynKrynicka, E.K., 2017. In vitro characteristics of Lactobacillus spp. strains isolated from the chicken digestive tract and their role in the inhibition of Campylobacter colonization. MicrobiologyOpen.
Lavari, L., Burns, P., Paez, R., Reinheimer, J., and Vinderola, G., 2017. Study of the effects of spray drying in whey-starch on the probiotic capacity of Lactobacillus rhamnosus 64 in the gut of mice. Journal of Applied Microbiology, 123(4), 992-1002.
Lee, B.H., Lo, Y.H., and Pan, T.M., 2013. Anti-obesity activity activity of Lactobacillus fermented soy milk products. Journal of Functional Foods, 5(2), 905-913. https://doi.org/10.1016/j.jff.2013.01.040
Maeda, M., Shibata, A., Biswas, G., Korenaga, H., Kono, T., Itami, T., and Sakai, M., 2014. Isolation of lactic acid bacteria from kuruma shrimp (Marsupenaeus japonicus) intestine and assessment of immunomodulatory role of a selected strain as probiotic. Marine Biotechnology, 16(2), 181-192. doi:10.1007/s10126-013-9532-1
https://doi.org/10.1007/s10126-013-9532-1
Matsumoto, S., Hara, T., Nagaoka, M., Mike, A., Mitsuyama, K., Sako, T., Yamamoto, M., Kado, S., and Takada, T., 2009. A component of polysaccharide peptidoglycan complex on Lactobacillus induced an improvement of murine model of inflammatory bowel disease and colitis-associated cancer. Immunology, 128(1), e170-e180.
https://www.dx.doi.org/10.1111/j.1365-2567.2008.02942.x
Matteotti, C., Haubruge, E., Thonart, P., Francis, F., De Pauw, E., Portetelle, D., and Vandenbol, M., 2011. Characterization of a new beta-glucosidase/beta-xylosidase from the gut microbiota of the termite (Reticulitermes santonensis). FEMS Microbiology Letters, 314(2), 147-157. https://doi.org/10.1111/j.1574-6968.2010.02161.x
Newaj-Fyzul, A., Adesiyun, A.A., Mutani, A., Ramsubhag, A., Brunt, J., and Austin, B., 2007. Bacillus subtilis AB1 controls Aeromonas infection in rainbow trout (Oncorhynchus mykiss, Walbaum). Journal of Applied Microbiology, 103(5), 1699-1706. https://doi.org/10.1111/j.1365-2672.2007.03402.x
Nikoskelainen, S., Ouwehand, A.C., Bylund, G., Salminen, S., and Lilius, E.M., 2003. Immune enhancement in rainbow trout (Oncorhynchus mykiss) by potential probiotic bacteria (Lactobacillus rhamnosus). Fish & Shellfish Immunology, 15(5), 443-452.
https://doi.org/10.1016/S1050-4648(03)00023-8
Park, D.Y., Ahn, Y.T., Park, S.H., Huh, C.S., Yoo, S.R., Yu, R., Sung, M.K., McGregor, R.A., and Choi, M.S., 2013. Supplementation of Lactobacillus curvatus HY7601 and Lactobacillus plantarum KY1032 in diet-induced obese mice is associated with gut microbial changes and reduction in obesity. PLoS One, 8(3). https://doi.org/10.1371/journal.pone.0059470
Pattukumar, V., Kanmani, P., Kumar, R.S., Yuvaraj, N., Paari, A., and Arul, V., 2014. Enhancement of innate immune system, survival and yield in Penaeus monodon reared in ponds using Streptococcus phocae PI80. Aquaculture Nutrition, 20(5), 505-513.
Pikuta, E.V., Hoover, R.B., Bei, A.K., Marsic, D., Whitman, W.B., Krader, P.E., and Tang, J., 2006. Trichococcus patagoniensis sp nov., a facultative anaerobe that grows at -5 degrees C, isolated from penguin guano in Chilean Patagonia. International Journal of Systematic and Evolutionary Microbiology, 56, 2055-2062.
https://doi.org/10.1099/ijs.0.64225-0
Pothakos, V., Snauwaert, C., De Vos, P., Huys, G., and Devlieghere, F., 2014. Psychrotrophic lactic acid bacterium (LAB) contamination: a spoilage problem for cold-stored and packaged food products. Communications in Agricultural and Applied Biological Sciences, 79(1), 137-142.
Rahman, N.M.A., Fu, H.T., Sun, S.M., Qiao, H., Jin, S., Bai, H.K., Zhang, W.Y., Liang, G.X., Gong, Y.S., Xiong, Y.W., and Wu,Y., 2016. Molecular cloning and expression pattern of oriental river prawn (Macrobrachium nipponense) nitric oxide synthase. Genetics and Molecular Research, 15(3).
Rajoka, M.S.R., Shi, J., Zhu, J., Shao, D., Huang, Q., Yang, H., and Jin, M., 2017. Capacity of lactic acid bacteria in immunity enhancement and cancer prevention. Applied Microbiology and Biotechnology, 101(1), 35-45.
Ringo, E., Bendiksen, H.R., Gausen, S.J., Sundsfjord, A., and Olsen, R. E., 1998. The effect of dietary fatty acids on lactic acid bacteria associated with the epithelial mucosa and from faecalia of Arctic charr, Salvelinus alpinus (L.). Journal of Applied Microbiology, 85(5), 855-864. https://doi.org/10.1046/j.1365-2672.1998.00595.x
Ringo, E., and Gatesoupe, F.J., 1998. Lactic acid bacteria in fish: a review. Aquaculture, 160(3-4), 177-203. https://doi.org/10.1016/S0044-8486(97)00299-8
Ringo, E., Lovmo, L., Kristiansen, M., Bakken, Y., Salinas, I., Myklebust, R., Olsen, R.E., and Mayhew, T.M., 2010. Lactic acid bacteria vs. pathogens in the gastrointestinal tract of fish: a review. Aquaculture Research, 41(4), 451-467. https://doi.org/10.1111/j.1365-2109.2009.02339.x
Schloss, P.D., Westcott, S.L., Ryabin, T., Hall, J.R., Hartmann, M., Hollister, E.B., Lesniewski, R.A., Oakley, B.B., Parks, D.H., and Robinson, C.J., 2009. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Applied and Environmental Microbiology, 75(23), 7537-7541. https://doi.org/10.1128/AEM.01541-09
Stolaki, M., De Vos, W.M., Kleerebezem, M., and Zoetendal, E.G., 2012. Lactic Acid Bacteria in the Gut.
Suzer, C., Coban, D., Kamaci, H.O., Saka, S., Firat, K., Otgucuoglu, O., and Kucuksari, H., 2008. Lactobacillus spp. bacteria as probiotics in gilthead sea bream (Sparus aurata, L.) larvae: Effects on growth performance and digestive enzyme activities. Aquaculture, 280(1-4), 140-145. https://doi.org/10.1016/j.aquaculture.2008.04.020
Tapia-Paniagua, S.T., Diaz-Rosales, P., Leon-Rubio, J.M., Garcia de La Banda, I., Lobo, C., Alarcon, F.J., Chabrillon, M., Rosas-Ledesma, P., Varela, J.L., Ruiz-Jarabo, I., Arijo, S., Esteban, M.A., Martinez-Manzanares, E., Mancera, J.M., Balebona, M.C., and Morinigo, M.A., 2012. Use of the probiotic Shewanella putrefaciens Pdp11 on the culture of Senegalese sole (Solea senegalensis, Kaup 1858) and gilthead seabream (Sparus aurata L.). Aquaculture International, 20(6), 1025-1039. https://doi.org/10.1007/s10499-012-9509-5
Tzeng, T.D., Pao, Y.Y., Chen, P.C., Weng, F.C.H., Jean, W.D., and Wang, D., 2015. Effects of host phylogeny and habitats on gut microbiomes of oriental river prawn (Macrobrachium nipponense). PLoS One, 10(7). https://www.dx.doi.org/10.1371/journal.pone.0132860
Van Hai, N., Fotedar, R., and Buller, N., 2007. Selection of probiotics by various inhibition test methods for use in the culture of western king prawns, Penaeus latisulcatus (Kishinouye). Aquaculture, 272(1-4), 231-239. https://doi.org/10.1016/j.aquaculture.2007.07.223
Vasquez, A., Forsgren, E., Fries, I., Paxton, R.J., Flaberg, E., Szekely, L., and Olofsson, T.C., 2012. Symbionts as major modulators of insect health: lactic acid bacteria and honeybees. PLoS One, 7(3).
https://doi.org/10.1371/journal.pone.0033188
Vazquez, L., Florez, A.B., Guadamuro, L., and Mayo, B., 2017. Effect of soy isoflavones on growth of representative bacterial species from the human gut. Nutrients, 9(7). https://doi.org/10.3390/nu9070727
Von Wright, A., and Axelsson, L., 2012. Lactic Acid Bacteria: An Introduction. https://doi.org/10.1016/S0044-8486(97)00299-8
Wang, Q., Garrity, G.M., Tiedje, J.M., and Cole, J.R., 2007. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Applied and Environmental Microbiology, 73(16), 5261-5267. https://doi.org/10.1128/AEM.00062-07
Wu, X., Zhang, H., Chen, J., Shang, S., Yan, J., Chen, Y., Tang, X., and Zhang, H., 2017. Analysis and comparison of the wolf microbiome under different environmental factors using three different data of Next Generation Sequencing. Scientific Reports, 7.
Xu, J., Chen, X., Yu, S., Su, Y., and Zhu, W., 2016. Effects of early intervention with sodium butyrate on gut microbiota and the expression of inflammatory cytokines in neonatal piglets. PLos One, 11(9). https://doi.org/10.1371/journal.pone.0162461
Yu, G., and Zhou, H., 2005. Current research status of fish immunostimulants. Journal of Jilin Agricultural University, 27(3), 344-349.
Zheng, X., Tang, J., Ren, G., and Wang, Y., 2017. The effect of four microbial products on production performance and water quality in integrated culture of freshwater pearl mussel and fishes. Aquaculture Research, 48(9), 4897-4909. https://www.dx.doi.org/10.1111/are.13309
DOI: https://doi.org/10.26789/AEB.2018.02.001
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